Single-Cell Transcriptome Sequencing

Introduction


10X Genomics single-cell RNA sequencing is a high-throughput cell capture technology based on microfluidics, droplet encapsulation, and barcode labeling. It enables the simultaneous isolation and labeling of 500–10,000 single cells, capturing the 3' or 5' transcriptome information of each cell. This approach allows for the study of gene expression profiles at high throughput and single-cell resolution, revealing the heterogeneity of complex cell populations and avoiding the masking of individual cell gene expression signals by population averaging.

Applications


Organs/Tissue Cell Atlas

Developmental Biology Research

Disease-Related Cell Type Discovery

Cancer Research

Virology Research

Highlights


Rare Cell Subtype Identification

True Single-cell Resolution

High Throughput

Multi-Omics Integration

Precision Medicine Potential

Workflow


Sample Preparation

Sample Preparation

Refer to the Sample
Submission Requirements

Sample QC

Sample Preparation
Single Nuclei Suspension Generation

Single Nuclei Suspension Generation

Refer to Single Nuclei
Suspension Generation Demo Protocols

Suspension QC

Single Nuclei Suspension Generation
Single Cell Library Preparation

Single Cell Library Preparation

· GEM (Gel Beads-In-Emulsion) generation and barcoding
· cDNA synthesis & amplification
· Short-read library construction

Library QC

Single Cell Library Preparation
Sequencing

Sequencing

· Platform: Illumina or BGI
· Strategy: PE150 or PE100
· Data volume: 100 G

Data QC

Sequencing
Bioinformatics Analysis

Bioinformatics Analysis

Refer to the demo report

Click >>

Analysis Workflow


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Data Delivery File Formats


Fastq Data Files

Sequencing Yield Display


Plant leaf:

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Mouse embryo:

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Sample Requirements


Technical Type Sample Type Sample Collection Transportation
Single-cell RNA Sequencing Animal

Quantity Requirements:
Parenchymal Organ Tissues (lung, liver, gland, etc.)≥ 200 mg
Adipose Tissue, Blood Vessels, Heart Valves, Muscle, etc.≥ 500 mg
Criteria: remove locally necrotic or damaged areas caused by electric scalpel, laser ablation, or spontaneous tissue necrosis, as well as non-target tissue components.

Snap-freeze in liquid nitrogen for 20–30 minutes, then store at -80°C or ship immediately.

Pack the sorted samples and embed them in dry ice and send it out as soon as possible.Ensure sufficient dry ice is used.

Plants Quantity Requirements: 1–2 g
Criteria: Prioritize tender, well-growing, and representative plants.
Snap-freeze in liquid nitrogen for 30 minutes, then store at -80°C or ship immediately.

Publications


Year Journal

Impact Factor

Title
2025 Nature Neuroscience 20 GABA-dependent microglial elimination of inhibitory synapses underlies neuronal hyperexcitability in epilepsy
2025 Nature Cancer 28.5 Skeletal muscle endothelial dysfunction through the activin A–PGC1α axis drives progression of cancer cachexia
2025 Nature Immunology 27.6 Bat organoids reveal antiviral responses at epithelial surfaces
2025 Immunity 26.3 Maternal natural killer cells drive neuroimmune disorders in offspring through aberrant secretion of extracellular granzyme B
2025 Cell 42.5 Post-gastrulation amnioids as a stem cell-derived model of human extra-embryonic development

What's the best choice?


 

Long-read Single-Cell Transcriptome Sequencing

Learn more>>>

Single-cell transcriptome sequencing

Sequencing Technology Nanopore PromethION Illumina
Reads Length Reads N50:~1kb 150bp
Delivery File Format Fastq Fastq
alyze Content

1、Gene expression,cell clustering,cell annotation

2、Identification of isoform diversity

3、Isoform quantification

4、Differential transcript analysis for cell clustering

5、Comparison of gene clustering results with isoform clustering results

6、Identification of cell subpopulations through differential alternative splicing

7、Isoform switching between cell populations

8、Identification of fusion genes in cell clusters

9、Identification of IncRNAs in cell clusters

1、Gene expression, cell clustering,cell annotation

Contact Us

If you are interested in our long-read sequencing services or potential collaboration, please contact us. Our team is ready to support your research with tailored solutions. We also welcome feedback from users to help us improve our services.

Contact Us
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Contact Us

E-mail:service@sailgene.com

WhatsApp:1-(617)-223-7544

Tel:16172237544

Email:service@sailgene.com

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