Meta HiC Sequencing

Introduction


Meta Hi-C sequencing is defined as a technology that integrates Hi-C technology with metagenomic sequencing. Based on the technical principles of Hi-C, all microorganisms in the sample are subjected to fixation and cross-linking, restriction enzyme digestion, proximal DNA ligation, and capture processes to obtain spatially proximal DNA fragments, followed by metagenomic library construction and sequencing.

Applications


Detection of the relationship between antibiotic resistance genes and hosts, research on the transfer and spread of antibiotic resistance genes

Detection of the relationship between plasmids and hosts

Detection of the relationship between mobile genetic elements and hosts

Detection of the relationship between bacteriophages and hosts

Product Advantages


Decipher microbial spatial interaction networks

Enhance microbial genome assembly quality

Precisely link functional genes to host microbes

Unveil spatial organization patterns of microbial communities

Integrate three-dimensional information

Workflow


Sample Preparation

Sample Preparation

Sufficient Samples

Sample QC

Sample Preparation
Hi-C Proximity Ligation

Hi-C Proximity Ligation

DNA Cross-linking and Fixation,Restriction Enzyme Digestion,Ligation,Biotin Capture

Library Construction

Library Construction

DNA Library Preparation

Library QC

Library Construction
Sequencing

Sequencing

Platform:illumina

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Technical Principle


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Data Delivery Format


FASTQ

Comparison with Other Technologies


Dimension

Hi-C Technology

Meta Hi-C Technology

Technical Position

Analysis of 3D chromatin structure in a single species

Interaction analysis among complex microbial communities

Research Object

Single species

Complex microbial mixed samples

Application Scenario

Research on 3D genome structure and gene regulation mechanism of a single species

Analysis of host-plasmid/ARGs associations and species interactions in complex microbial communities

ore Purpose

Construct chromosome-level genome of a single species and analyze chromatin interactions

Analyze horizontal gene transfer and host-mobile element associations in microbial communities

Article Case


Data

Journal

Impact Factor

Title

2025.9

Nature Microbiology

19.4

Phages with a broad host range are common across ecosystems

2024.3

Nature Communications

16.6

Host- plasmid network structure in wastewater is linked to antimicrobial resistance genes

2023.11

Nature Communications

16.6

Hi-C metagenome sequencing reveals soil phage–host interactions

2022.1

Nature Biotechnology

54.9

Generating lineage-resolved, complete  metagenome-assembled genomes from complex  microbial communities

2021.2

Elife

10.8

MetaHiC phage-bacteria infection network reveals active cycling phages of the healthy human gut

Sample Submission Requirements


Meta HiC Sequencing pecifications:

Sample Type

Weight

Precautions

Feces

2~5 g

Store at -80℃ and transport on dry ice

Soil

5~8 g

Other types of samples can be consulted with the application scientist

Contact Us

If you are interested in our long-read sequencing services or potential collaboration, please contact us. Our team is ready to support your research with tailored solutions. We also welcome feedback from users to help us improve our services.

Contact Us
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Contact Us

E-mail:service@sailgene.com

WhatsApp:1-(617)-223-7544

Tel:16172237544

Email:service@sailgene.com

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